UNIX and NGS
praha-november-2021
Installation instructions
Connecting to the remote machine
Session 1: Basic Unix
Session 2: Genomic data
Session 3: Plain text file processing in Unix
Session 4: Unix - “Real” Project
Session 5: Graphics session
Session 6: Read quality
Session 7: Genome assembly
Session 8: Bioinformatic pipelines
Session 9: Variant quality
Links
A few more tips
Reference manual for Unix introduction
Important NGS formats
Additional exercises
Course materials preparation
Slide decks
UNIX and NGS
Docs
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Index
Edit on GitHub
Index