UNIX and NGS
1.0
  • Installation instructions
  • Connecting to the remote machine
  • Session 1: Basic Unix
  • Session 2: Genomics data
  • Session 3: Plain text file processing in Unix
  • Session 4: Running a project
  • Session 5: Graphics session
  • Session 6: Git and GitHub
  • Session 7: Variant quality
  • Session 8: Bioinformatic pipelines
  • Links
  • A few more tips
  • Reference manual for Unix introduction
  • Important NGS formats
  • Additional exercises
  • Course materials preparation
  • Slide decks
UNIX and NGS
  • Slide decks
  • View page source

Slide decks

Unix - Introduction (Libor)

Basics of Unix (Vasek)

Genomic data (Vasek)

Plain text file processing (Vasek)

Graphics session (Libor)

Git and GitHub (Libor)

Bioinformatic pipelines (Vasek)

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© Copyright Libor Morkovsky, Vaclav Janousek.

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